Mami Taniuchi

Butzin-Dozier, Z., Ji, Y., Coyle, J., Malenica, I., McQuade, E. T. R., Grembi, J. A., . . . Lin, A. (2024). Treatment Heterogeneity of Water, Sanitation, Hygiene, and Nutrition Interventions on Child Growth by Environmental Enteric Dysfunction and Pathogen Status for Young Children in Bangladesh.. medRxiv. doi:10.1101/2024.03.21.24304684

Lee, B., Kader, M. A., Alam, M., Dickson, D. M., Harvey, P., Colgate, E. R., . . . Kirkpatrick, B. D. (2024). Infant Non-Secretor Histoblood Group Antigen Phenotype Reduces Susceptibility to Both Symptomatic and Asymptomatic Rotavirus Infection. PATHOGENS, 13(3). doi:10.3390/pathogens13030223

Gerety, M. K., Kim, D. K., Carpenter, R. M., Ma, J. Z., Chisholm, C., Taniuchi, M., . . . Petri Jr, W. A. (2024). Systemic inflammation, enteropathogenic E. Coli, and micronutrient insufficiencies in the first trimester as possible predictors of preterm birth in rural Bangladesh: a prospective study. BMC PREGNANCY AND CHILDBIRTH, 24(1). doi:10.1186/s12884-024-06266-9

Cohen, A., Vikesland, P., Pruden, A., Lee, L. M., Krometis, L. -A., Darling, A., . . . Taniuchi, M. (2024). Making waves: The benefits and challenges of responsibly implementing wastewater-based surveillance for rural communities. WATER RESEARCH, 250. doi:10.1016/j.watres.2023.121095

Ciszewski, J., Taniuchi, M., Lee, B., Colgate, E. R., Platts-Mills, J. A., Haque, R., . . . McQuade, E. T. R. (2023). Differences in Rotavirus Shedding and Duration by Infant Oral Rotavirus Vaccination Status in Dhaka, Bangladesh, 2011-2014. JOURNAL OF INFECTIOUS DISEASES, 230(1), e75-e79. doi:10.1093/infdis/jiad502

Wettstone, E. G., Islam, M. O., Hughlett, L., Reagen, C., Shirin, T., Rahman, M., . . . Blake, I. M. (2023). Interactive SARS-CoV-2 dashboard for real-time geospatial visualisation of sewage and clinical surveillance data from Dhaka, Bangladesh: a tool for public health situational awareness. BMJ GLOBAL HEALTH, 8(8). doi:10.1136/bmjgh-2023-012921

Garbern, S. C., Islam, M. T., Islam, K., Ahmed, S. M., Brintz, B. J., Khan, A. I., . . . Leung, D. T. (2023). Derivation and External Validation of a Clinical Prediction Model for Viral Diarrhea Etiology in Bangladesh. OPEN FORUM INFECTIOUS DISEASES, 10(7). doi:10.1093/ofid/ofad295

McQuade, E. T. R., Blake, I. M., Brennhofer, S. A., Islam, M. O., Sony, S. S. S., Rahman, T., . . . Taniuchi, M. (2023). Real-time sewage surveillance for SARS-CoV-2 in Dhaka, Bangladesh versus clinical COVID-19 surveillance: a longitudinal environmental surveillance study (December, 2019-December, 2021). LANCET MICROBE, 4(6), E442-E451. doi:10.1016/S2666-5247(23)00010-1

Cohen, A., Rasheduzzaman, M., Darling, A., Krometis, L. -A., Edwards, M., Brown, T., . . . McQuade, E. T. R. (2022). Bottled and Well Water Quality in a Small Central Appalachian Community: Household-Level Analysis of Enteric Pathogens, Inorganic Chemicals, and Health Outcomes in Rural Southwest Virginia. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH, 19(14). doi:10.3390/ijerph19148610

Garbern, S. C., Nelson, E. J., Nasrin, S., Keita, A. M., Brintz, B. J., Gainey, M., . . . Leung, D. T. (2022). External validation of a mobile clinical decision support system for diarrhea etiology prediction in children: A multicenter study in Bangladesh and Mali. ELIFE, 11. doi:10.7554/eLife.72294

Obiero, C. W., Gumbi, W., Mwakio, S., Mwangudzah, H., Seale, A. C., Taniuchi, M., . . . Berkley, J. A. (2022). Detection of pathogens associated with early-onset neonatal sepsis in cord blood at birth using quantitative PCR.. Wellcome open research, 7, 3. doi:10.12688/wellcomeopenres.17386.3

Colston, J. M., Taniuchi, M., Ahmed, T., Ferdousi, T., Kabir, F., Mduma, E., . . . Platts-Mills, J. A. (2022). Intestinal Colonization With Bifidobacterium longum Subspecies Is Associated With Length at Birth, Exclusive Breastfeeding, and Decreased Risk of Enteric Virus Infections, but Not With Histo-Blood Group Antigens, Oral Vaccine Response or Later Growth in Three Birth Cohorts. FRONTIERS IN PEDIATRICS, 10. doi:10.3389/fped.2022.804798

Famulare, M., Wong, W., Haque, R., Platts-Mills, J. A., Saha, P., Aziz, A. B., . . . Taniuchi, M. (2021). Multiscale model for forecasting Sabin 2 vaccine virus household and community transmission. PLOS COMPUTATIONAL BIOLOGY, 17(12). doi:10.1371/journal.pcbi.1009690

Donowitz, J. R., Pu, Z., Lin, Y., Alam, M., Ferdous, T., Shama, T., . . . Petri, W. A. J. (2022). Small Intestine Bacterial Overgrowth in Bangladeshi Infants Is Associated With Growth Stunting in a Longitudinal Cohort. AMERICAN JOURNAL OF GASTROENTEROLOGY, 117(1), 167-175. doi:10.14309/ajg.0000000000001535

Pholwat, S., Liu, J., Taniuchi, M., Haque, R., Alam, M. M., Faruque, A. S. G., . . . Houpt, E. R. (2022). Use of Molecular Methods To Detect Shigella and Infer Phenotypic Resistance in a Shigella Treatment Study. JOURNAL OF CLINICAL MICROBIOLOGY, 60(1). doi:10.1128/JCM.01774-21

Liu, J., Pholwat, S., Zhang, J., Taniuchi, M., Haque, R., Alam, M., . . . Houpt, E. (2021). Evaluation of Molecular Serotyping Assays for Shigella flexneri Directly on Stool Samples. JOURNAL OF CLINICAL MICROBIOLOGY, 59(2). doi:10.1128/JCM.02455-20

Donowitz, J. R., Drew, J., Taniuchi, M., Platts-Mills, J. A., Alam, M., Ferdous, T., . . . Petri, W. A. (2021). Diarrheal Pathogens Associated With Growth and Neurodevelopment. CLINICAL INFECTIOUS DISEASES, 73(3), E683-E691. doi:10.1093/cid/ciaa1938

Valesano, A. L., Taniuchi, M., Fitzsimmons, W. J., Islam, M. O., Ahmed, T., Zaman, K., . . . Lauring, A. S. (2021). The Early Evolution of Oral Poliovirus Vaccine Is Shaped by Strong Positive Selection and Tight Transmission Bottlenecks. CELL HOST & MICROBE, 29(1), 32-+. doi:10.1016/j.chom.2020.10.011

Pavlinac, P. B., Platts-Mills, J. A., Tickell, K. D., Liu, J., Juma, J., Kabir, F., . . . Kotloff, K. L. (2021). The Clinical Presentation of Culture-positive and Culture-negative, Quantitative Polymerase Chain Reaction (qPCR)-Attributable Shigellosis in the Global Enteric Multicenter Study and Derivation of a Shigella Severity Score: Implications for Pediatric Shigella Vaccine Trials. CLINICAL INFECTIOUS DISEASES, 73(3), E569-E579. doi:10.1093/cid/ciaa1545

Goddard, F. G. B., Ban, R., Barr, D. B., Brown, J., Cannon, J., Colford, J. M. J., . . . Clasen, T. (2020). Measuring Environmental Exposure to Enteric Pathogens in Low-Income Settings: Review and Recommendations of an Interdisciplinary Working Group. ENVIRONMENTAL SCIENCE & TECHNOLOGY, 54(19), 11673-11691. doi:10.1021/acs.est.0c02421

Grembi, J. A., Lin, A., Karim, M. A., Islam, M. O., Miah, R., Arnold, B. F., . . . Luby, S. P. (2023). Effect of Water, Sanitation, Handwashing, and Nutrition Interventions on Enteropathogens in Children 14 Months Old: A Cluster-Randomized Controlled Trial in Rural Bangladesh. JOURNAL OF INFECTIOUS DISEASES, 227(3), 434-447. doi:10.1093/infdis/jiaa549

Pedrosa de Macena, L. D. G., Feitosa, R. C., Vieira, C. B., Araujo, I. T., Taniuchi, M., & Miagostovich, M. P. (2021). Microbiological assessment of an urban lagoon system in the coastal zone of Rio de Janeiro, Brazil. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 28(1), 1170-1180. doi:10.1007/s11356-020-10479-8

Taniuchi, M., Islam, K., Abu Sayeed, M., Platts-Mills, J. A., Islam, M. T., Ul Khabir, M. I., . . . Qadri, F. (2021). Etiology of Diarrhea Requiring Hospitalization in Bangladesh by Quantitative Polymerase Chain Reaction, 2014-2018. CLINICAL INFECTIOUS DISEASES, 73(9), E2493-E2499. doi:10.1093/cid/ciaa840

Houpt, E. R., Ferdous, T., Ara, R., Ibrahim, M., Alam, M. M., Kabir, M., . . . Haque, R. (2021). Clinical Outcomes of Drug-resistant Shigellosis Treated With Azithromycin in Bangladesh. CLINICAL INFECTIOUS DISEASES, 72(10), 1793-1798. doi:10.1093/cid/ciaa363

Pholwat, S., Pongpan, T., Chinli, R., Rogawski McQuade, E. T., Thaipisuttikul, I., Ratanakorn, P., . . . Foongladda, S. (2020). Antimicrobial Resistance in Swine Fecal Specimens Across Different Farm Management Systems. FRONTIERS IN MICROBIOLOGY, 11. doi:10.3389/fmicb.2020.01238

Church, J. A., Rogawski McQuade, E. T., Mutasa, K., Taniuchi, M., Rukobo, S., Govha, M., . . . Prendergast, A. J. (2019). Enteropathogens and Rotavirus Vaccine Immunogenicity in a Cluster Randomized Trial of Improved Water, Sanitation and Hygiene in Rural Zimbabwe. PEDIATRIC INFECTIOUS DISEASE JOURNAL, 38(12), 1242-1248. doi:10.1097/INF.0000000000002485

Lee, B., Dickson, D. M., Alam, M., Afreen, S., Kader, A., Afrin, F., . . . Kirkpatrick, B. D. (2020). The effect of increased inoculum on oral rotavirus vaccine take among infants in Dhaka, Bangladesh: A double-blind, parallel group, randomized, controlled trial. VACCINE, 38(1), 90-99. doi:10.1016/j.vaccine.2019.09.088

Donowitz, J. R., Parikh, H. I., Taniuchi, M., Gilchrist, C. A., Haque, R., Kirkpatrick, B. D., . . . Petri, W. A. J. (2019). Increased Fecal Lactobacillus Is Associated With a Positive Glucose Hydrogen Breath Test in Bangladeshi Children. OPEN FORUM INFECTIOUS DISEASES, 6(7). doi:10.1093/ofid/ofz266

Pholwat, S., Liu, J., Taniuchi, M., Chinli, R., Pongpan, T., Thaipisutikul, I., . . . Houpt, E. R. (2019). Genotypic antimicrobial resistance assays for use on E. coli isolates and stool specimens. PLOS ONE, 14(5). doi:10.1371/journal.pone.0216747

Platts-Mills, J. A., Liu, J., Rogawski, E. T., Kabir, F., Lertsethtakarn, P., Siguas, M., . . . Houpt, E. R. (2018). Use of quantitative molecular diagnostic methods to assess the aetiology, burden, and clinical characteristics of diarrhoea in children in low-resource settings: a reanalysis of the MAL-ED cohort study. LANCET GLOBAL HEALTH, 6(12), E1309-E1318. doi:10.1016/S2214-109X(18)30349-8

Rogawski, E. T., Liu, J., Platts-Mills, J. A., Kabir, F., Lertsethtakarn, P., Siguas, M., . . . Houpt, E. R. (2018). Use of quantitative molecular diagnostic methods to investigate the effect of enteropathogen infections on linear growth in children in low-resource settings: longitudinal analysis of results from the MAL-ED cohort study. LANCET GLOBAL HEALTH, 6(12), E1319-E1328. doi:10.1016/S2214-109X(18)30351-6

Korpe, P. S., Gilchrist, C., Burkey, C., Taniuchi, M., Ahmed, E., Madan, V., . . . Duggal, P. (2019). Case-Control Study of Cryptosporidium Transmission in Bangladeshi Households. CLINICAL INFECTIOUS DISEASES, 68(7), 1073-1079. doi:10.1093/cid/ciy593

Schnee, A. E., Haque, R., Taniuchi, M., Uddin, M. J., & Petri, W. A. J. (2018). Evaluation of Two New Membrane-Based and Microtiter Plate Enzyme-Linked Immunosorbent Assays for Detection of Campylobacter jejuni in Stools of Bangladeshi Children. JOURNAL OF CLINICAL MICROBIOLOGY, 56(9). doi:10.1128/JCM.00702-18

Schnee, A. E., Haque, R., Taniuchi, M., Uddin, M. J., Alam, M. M., Liu, J., . . . Platts-Mills, J. A. (2018). Identification of Etiology-Specific Diarrhea Associated With Linear Growth Faltering in Bangladeshi Infants. AMERICAN JOURNAL OF EPIDEMIOLOGY, 187(10), 2210-2218. doi:10.1093/aje/kwy106

Kabir, M., Ahmed, E., Hossain, B., Alam, M., Ahmed, S., Taniuchi, M., . . . Haque, R. (2018). Giardia/Cryptosporidium QUIK CHEK Assay Is More Specific Than Quantitative Polymerase Chain Reaction for Rapid Point-of-care Diagnosis of Cryptosporidiosis in Infants in Bangladesh. CLINICAL INFECTIOUS DISEASES, 67(12), 1897-1903. doi:10.1093/cid/ciy372

Lee, B., Dickson, D. M., deCamp, A. C., Colgate, E. R., Diehl, S. A., Uddin, M. I., . . . Kirkpatrick, B. D. (2018). Histo-Blood Group Antigen Phenotype Determines Susceptibility to Genotype-Specific Rotavirus Infections and Impacts Measures of Rotavirus Vaccine Efficacy. JOURNAL OF INFECTIOUS DISEASES, 217(9), 1399-1407. doi:10.1093/infdis/jiy054

Taniuchi, M., Famulare, M., Zaman, K., Uddin, M. J., Upfill-Brown, A. M., Ahmed, T., . . . Petrijr, W. A. (2017). Community transmission of type 2 poliovirus after cessation of trivalent oral polio vaccine in Bangladesh: an open-label cluster-randomised trial and modelling study. LANCET INFECTIOUS DISEASES, 17(10), 1069-1079. doi:10.1016/S1473-3099(17)30358-4

Upfill-Brown, A., Taniuchi, M., Platts-Mills, J. A., Kirkpatrick, B., Burgess, S. L., Oberste, M. S., . . . Petri, W. A. J. (2017). Nonspecific Effects of Oral Polio Vaccine on Diarrheal Burden and Etiology Among Bangladeshi Infants. CLINICAL INFECTIOUS DISEASES, 65(3), 414-419. doi:10.1093/cid/cix354

Platts-Mills, J. A., Taniuchi, M., Uddin, M. J., Sobuz, S. U., Mahfuz, M., Gaffar, S. M. A., . . . Ahmed, T. (2017). Association between enteropathogens and malnutrition in children aged 6-23 mo in Bangladesh: a case-control study. AMERICAN JOURNAL OF CLINICAL NUTRITION, 105(5), 1132-1138. doi:10.3945/ajcn.116.138800

Giri, S., Rajan, A. K., Kumar, N., Dhanapal, P., Venkatesan, J., Iturriza-Gomara, M., . . . Kang, G. (2017). Comparison of culture, single and multiplex real-time PCR for detection of Sabin poliovirus shedding in recently vaccinated Indian children. JOURNAL OF MEDICAL VIROLOGY, 89(8), 1485-1488. doi:10.1002/jmv.24793

Liu, J., Platts-Mills, J. A., Juma, J., Kabir, F., Nkeze, J., Okoi, C., . . . Houpt, E. R. (2016). Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study. LANCET, 388(10051), 1291-1301. doi:10.1016/S0140-6736(16)31529-X

Taniuchi, M., Platts-Mills, J. A., Begum, S., Uddin, M. J., Sobuz, S. U., Liu, J., . . . Houpt, E. R. (2016). Impact of enterovirus and other enteric pathogens on oral polio and rotavirus vaccine performance in Bangladeshi infants. VACCINE, 34(27), 3068-3075. doi:10.1016/j.vaccine.2016.04.080

Mychaleckyj, J. C., Haque, R., Carmolli, M., Zhang, D., Colgate, E. R., Nayak, U., . . . Petri, W. A. J. (2016). Effect of substituting IPV for tOPV on immunity to poliovirus in Bangladeshi infants: An open-label randomized controlled trial. VACCINE, 34(3), 358-366. doi:10.1016/j.vaccine.2015.11.046

Kirkpatrick, B. D., Colgate, E. R., Mychaleckyj, J. C., Hague, R., Dickson, D. M., Carmolli, M. P., . . . Petri, W. A. J. (2015). The "Performance of Rotavirus and Oral Polio Vaccines in Developing Countries" (PROVIDE) Study: Description of Methods of an Interventional Study Designed to Explore Complex Biologic Problems. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 92(4), 744-751. doi:10.4269/ajtmh.14-0518

Taniuchi, M., Begum, S., Uddin, M. J., Platts-Mills, J. A., Liu, J., Kirkpatrick, B. D., . . . Houpt, E. R. (2015). Kinetics of Poliovirus Shedding following Oral Vaccination as Measured by Quantitative Reverse Transcription-PCR versus Culture. JOURNAL OF CLINICAL MICROBIOLOGY, 53(1), 206-211. doi:10.1128/JCM.02406-14

Houpt, E., Gratz, J., Kosek, M., Zaidi, A. K. M., Qureshi, S., Kang, G., . . . Lang, D. (2014). Microbiologic Methods Utilized in the MAL-ED Cohort Study. CLINICAL INFECTIOUS DISEASES, 59, S225-S232. doi:10.1093/cid/ciu413

Liu, J., Kabir, F., Manneh, J., Lertsethtakarm, P., Begum, S., Gratz, J., . . . Houpt, E. R. (2014). Development and assessment of molecular diagnostic tests for 15 enteropathogens causing childhood diarrhoea: a multicentre study. LANCET INFECTIOUS DISEASES, 14(8), 716-724. doi:10.1016/S1473-3099(14)70808-4

Jiang, N. M., Tofail, F., Moonah, S. N., Scharf, R. J., Taniuchi, M., Ma, J. Z., . . . Petri, W. A. J. (2014). Febrile illness and pro-inflammatory cytokines are associated with lower neurodevelopmental scores in Bangladeshi infants living in poverty. BMC PEDIATRICS, 14. doi:10.1186/1471-2431-14-50

Platts-Mills, J. A., Liu, J., Gratz, J., Mduma, E., Amour, C., Swai, N., . . . Houpt, E. R. (2014). Detection of Campylobacter in Stool and Determination of Significance by Culture, Enzyme Immunoassay, and PCR in Developing Countries. JOURNAL OF CLINICAL MICROBIOLOGY, 52(4), 1074-1080. doi:10.1128/JCM.02935-13

Taniuchi, M., Sobuz, S. U., Begum, S., Platts-Mills, J. A., Liu, J., Yang, Z., . . . Houpt, E. R. (2013). Etiology of Diarrhea in Bangladeshi Infants in the First Year of Life Analyzed Using Molecular Methods. JOURNAL OF INFECTIOUS DISEASES, 208(11), 1794-1802. doi:10.1093/infdis/jit507

Liu, J., Gratz, J., Amour, C., Kibiki, G., Becker, S., Janaki, L., . . . Houpt, E. R. (2013). A Laboratory-Developed TaqMan Array Card for Simultaneous Detection of 19 Enteropathogens. JOURNAL OF CLINICAL MICROBIOLOGY, 51(2), 472-480. doi:10.1128/JCM.02658-12

Shimokawa, C., Kabir, M., Taniuchi, M., Mondal, D., Kobayashi, S., Ali, I. K. M., . . . Hamano, S. (2012). Entamoeba moshkovskii Is Associated With Diarrhea in Infants and Causes Diarrhea and Colitis in Mice. JOURNAL OF INFECTIOUS DISEASES, 206(5), 744-751. doi:10.1093/infdis/jis414

Taniuchi, M., Walters, C. C., Gratz, J., Maro, A., Kumburu, H., Serichantalergs, O., . . . Houpt, E. R. (2012). Development of a multiplex polymerase chain reaction assay for diarrheagenic Escherichia coli and Shigella spp. and its evaluation on colonies, culture broths, and stool. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 73(2), 121-128. doi:10.1016/j.diagmicrobio.2012.03.008

Nelson, A. M., Walk, S. T., Taube, S., Taniuchi, M., Houpt, E. R., Wobus, C. E., & Young, V. B. (2012). Disruption of the Human Gut Microbiota following Norovirus Infection. PLOS ONE, 7(10). doi:10.1371/journal.pone.0048224

Liu, J., Gratz, J., Maro, A., Kumburu, H., Kibiki, G., Taniuchi, M., . . . Houpta, E. R. (2012). Simultaneous Detection of Six Diarrhea-Causing Bacterial Pathogens with an In-House PCR-Luminex Assay. JOURNAL OF CLINICAL MICROBIOLOGY, 50(1), 98-103. doi:10.1128/JCM.05416-11

Taniuchi, M., Verweij, J. J., Sethabutr, O., Bodhidatta, L., Garcia, L., Maro, A., . . . Houpt, E. R. (2011). Multiplex polymerase chain reaction method to detect Cyclospora, Cystoisospora, and Microsporidia in stool samples. DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 71(4), 386-390. doi:10.1016/j.diagmicrobio.2011.08.012

Taniuchi, M., Verweij, J. J., Noor, Z., Sobuz, S. U., van Lieshout, L., Petri, W. A. J., . . . Houpt, E. R. (2011). High Throughput Multiplex PCR and Probe-based Detection with Luminex Beads for Seven Intestinal Parasites. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 84(2), 332-337. doi:10.4269/ajtmh.2011.10-0461

Liu, J., Kibiki, G., Maro, V., Maro, A., Kumburu, H., Swai, N., . . . Houpt, E. (2011). Multiplex reverse transcription PCR Luminex assay for detection and quantitation of viral agents of gastroenteritis. JOURNAL OF CLINICAL VIROLOGY, 50(4), 308-313. doi:10.1016/j.jcv.2010.12.009

Taniuchi, M., Liu, J., Gratz, J., Nduma, H., Maro, A., Kibiki, G., . . . Houpt, E. R. (2010). MULTIPLEX DIAGNOSTIC PROTOCOL FOR ENTEROPATHOGENS. AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 83(5), 144. Retrieved from https://www.webofscience.com/