Archives: Recent Publications

Transformation of alignment files improves performance of variant callers for long-read RNA sequencing data

4/24/2023

Long-read RNA sequencing (lrRNA-seq) produces detailed information about full-length transcripts, including novel and sample-specific isoforms. Furthermore, there is an opportunity to call variants directly from lrRNA-seq data. However, most state-of-the-art…

Pyramidal neuron morphogenesis requires a septin network that stabilizes filopodia and suppresses lamellipodia during neurite initiation

4/21/2023

Pyramidal neurons are a major cell type of the forebrain, consisting of a pyramidally shaped soma with axonal and apicobasal dendritic processes. It is poorly understood how the neuronal soma…

Proteomic profiling of the oncogenic septin 9 reveals isoform-specific interactions in breast cancer cells

4/21/2023

Septins are a family of multimeric GTP-binding proteins, which are abnormally expressed in cancer. Septin 9 (SEPT9) is an essential and ubiquitously expressed septin with multiple isoforms, which have differential…

A septin GTPase scaffold of dynein-dynactin motors triggers retrograde lysosome transport

4/21/2023

The metabolic and signaling functions of lysosomes depend on their intracellular positioning and trafficking, but the underlying mechanisms are little understood. Here, we have discovered a novel septin GTPase-based mechanism…

Septins guide noncentrosomal microtubules to promote focal adhesion disassembly in migrating cells

4/21/2023

Endothelial cell migration is critical for vascular angiogenesis and is compromised to facilitate tumor metastasis. The migratory process requires the coordinated assembly and disassembly of focal adhesions (FA), actin, and…

Septins mediate a microtubule-actin crosstalk that enables actin growth on microtubules

4/21/2023

Cellular morphogenesis and processes such as cell division and migration require the coordination of the microtubule and actin cytoskeletons. Microtubule-actin crosstalk is poorly understood and largely regarded as the capture…

Right place, right time – Spatial guidance of neuronal morphogenesis by septin GTPases

4/21/2023

Neuronal morphogenesis is guided by outside-in signals and inside-out mechanisms, which require spatiotemporal precision. How the intracellular mechanisms of neuronal morphogenesis are spatiotemporally controlled is not well understood. Septins comprise…

Spatial regulation of microtubule-dependent transport by septin GTPases

4/21/2023

The intracellular long-range transport of membrane vesicles and organelles is mediated by microtubule motors (kinesins, dynein) which move cargo with spatiotemporal accuracy and efficiency. How motors navigate the microtubule network…

Cellular functions of actin- and microtubule-associated septins

4/21/2023

Septins are an integral component of the cytoskeleton, assembling into higher-order oligomers and filamentous polymers that associate with actin filaments, microtubules and membranes. Here, we review septin interactions with actin…

Connexin 43-mediated neurovascular interactions regulate neurogenesis in the adult brain subventricular zone

4/21/2023

The subventricular zone (SVZ) is the largest neural stem cell (NSC) niche in the adult brain; herein, the blood-brain barrier is leaky, allowing direct interactions between NSCs and endothelial cells…