Shin, Jung-Bum

Jung-Bum  Shin

Jung-Bum Shin

Primary Appointment

Associate Professor, Neuroscience

Education

  • BS, Biochemistry, University of Tubingen
  • PhD, Neuroscience, Free University of Berlin
  • Postdoc, Hearing Research, Oregon Health Sciences University

Contact Information

409 Lane Road
Charlottesville, VA 22908
Telephone: 434-924-1289
Fax: 434-982-4380
Email: js2ee@virginia.edu
Website: http://www.shinlabuva.com

Research Interests

Auditory Neurobiology

Research Description



Hearing loss is America's leading disability, affecting millions of people of all ages. To develop preventative and restorative clinical approaches, it is crucial to understand how the hearing process works on the cellular and molecular level. Hearing is mediated by sensory hair cells, part of a highly specialized neuroepithelium in the inner ear. The goal of our lab is to unravel the mechanisms that mediate the development, function, and degeneration of hair cells.

Research focus I: Discovery of novel proteins involved in hearing and deafness

Our lab uses a combination of proteomics, protein biochemistry, cell biology and mouse genetics tools to discover novel components involved in the molecular process of hearing. In short, we 1) sequence proteins in the sensory hair cell using mass spectrometry, 2) compare the proteomics data with genetic data to identify possible deafness genes, 3) characterize the function of these proteins, and 4) use the CRISPR/Cas9 system to generate transgenic mouse models to evaluate the role of these putative deafness genes in vivo. Presently, we are applying this workflow on 10 different potential deafness genes.

Research focus II: Neurodegeneration and protection of sensory hair cells

Aminoglycosides comprise a highly potent class of antibiotics, but their clinical use is limited due to nephrotoxicity and ototoxicity. Despite longstanding research efforts, our understanding of the mechanisms underlying aminoglycoside ototoxicity remains limited, and methods for clinical intervention have yet to emerge. We have recently found that the regulation of protein homeostasis in hair cells is severely affected by aminoglycosides. Protein homeostasis is at the center of general cellular homeostasis, and its dysregulation can activate various stress pathways leading to cellular degeneration and death. We are currently exploring the involvement of novel stress pathways in aminoglycoside-induced hair cell degeneration, with special emphasis on the discovery of novel drugs to prevent hair cell degeneration by blocking stress pathways. Research focus III: CRISPR/Cas-mediated gene therapy of deafness mutations Gene therapy to repair deafness mutations is a highly relevant goal in deafness research. In a remarkably short time period, the CRISPR/Cas9 system has emerged as arguably the most efficient genome engineering tool to date. The goal of this project is to engineer a novel, modified CRISPR system that allows packaging in an adeno-associated vector, which presently is the only system for in vivo delivery of genetic material into adult sensory hair cells. This tool will be used to repair deafness mutations in a mouse model.

Selected Publications