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Biophysics & Structural Biology

Biophysics

Research in Biophysics at UVA utilizes quantitative approaches to understand the physical and chemical basis of complex biological processes. Biological processes are studied at every level and across many fields, from the theoretical to the experimental.

The Biophysics Graduate Program at the University of Virginia is one of the oldest in the country. We employ a wide range of experimental and computational approaches in a highly interactive and multidisciplinary environment.  One of our strengths is in the study of membranes, which are of fundamental importance for biological systems. Membranes compartmentalize the cell, thereby controlling the internal cellular environment.  They are sites for energy transduction and signaling.  Finally, many regulatory processes take place at membrane surfaces.

Students in biophysics at UVA gain a strong foundation in biophysical approaches and analysis through innovative research and didactic coursework.

Structural Biology

structural biology data graphicResearch in Structural Biology at UVA seeks to acquire a thorough understanding of biological function by gaining a detailed knowledge of the structure of the macromolecules that comprise the machinery of life.Students interested in Structural Biology pursue research designed to determine the 3D structures of proteins and nucleic acids using a variety of methods, including nuclear magnetic resonance spectroscopy, x-ray crystallography, electron microscopy, and electron paramagnetic resonance spectroscopy.  Through the use of these different structural methodologies, we are able to gain unique and complementary information about the structure of macromolecules.  These structures, in turn, provide important insights into the molecular basis of function and provide a framework for the design of experiments to address biological processes involving the macromolecules under investigation.  Structures of medically relevant targets can also play a critical role in accelerating the process of drug design through the use of structure-based lead compound discovery.

Structural biology laboratories at the University of Virginia have established strengths in integral membrane proteins, structural genomics, cell signaling factors, as well as macromolecular assemblies such virus particles and filaments.

Faculty

  • Agaisse, Hervé

    Genetic approaches, cellular and molecular biology of intracellular pathogen infection

  • Bao, Huan

    Biophysics of membrane pore formation; research and therapeutic applications of lipid nanoparticles.

  • Bayliss, Douglas A.

    Mechanisms of neuromodulation in central neurons

  • Bekiranov, Stefan

    Computational Biology; Bioinformatics; Precision Medicine; Machine Learning/AI; Quantum Computing

  • Bourne, Philip E

    Data Science

  • Bushweller, John H.

    Drug Development Targeting Transcription Drivers in Cancer; Structure/Function Studies of Transcription Factor Drivers in Cancer

  • Cafiso, David S.

    Molecular Mechanisms for Membrane Transport and Cell Signaling

  • Columbus, Linda

    Biophysical Chemistry: Membrane protein structure, function, and dynamics

  • Derewenda, Zygmunt S.

    Structure-function relationships in proteins

  • DuBay, Kateri

    The design of self-assembling nanomaterials

  • Egelman, Edward H.

    Structure and Function of Macromolecular Complexes Using Electron Microscopy

  • Flowers, Sarah

    Impact of APOE and lipid metabolism on cell function in Alzheimer's disease.

  • Gahlmann, Andreas

    Super-resolution fluorescence imaging of bacterial cells

  • Jomaa, Ahmad

    Localisation of nascent proteins to sub-cellular compartments

  • Kedes, Dean H.

    Human Herpes virus associated with malignancy, including Kaposi's Sarcoma

  • Keller, Raymond E.

    Cellular and molecular mechanisms of morphogenesis

  • Kenworthy, Anne

    Architecture and function of biological membranes

  • Landers, James P.

    Bioanalytical Chemistry on Microchips

  • Levental, Ilya

    Composition, Biophysics and Physiology of Cellular Membranes

  • Minor, Wladek

    Structure-Function Relationships in Macromolecules; Infectious Diseases and Drug Discovery; Bioinformatics and Big Data; Scientific Reproducibility

  • Peirce-Cottler, Shayn M.

    Tissue Engineering and Regeneration, Computational Systems Biology, Vascular Growth and Remodeling, Stem Cell Therapies

  • Pompano, Rebecca

    Bioanalytical tools for inflammatory disease

  • Qi, Ling

    Delineate the physiological importance and structure-function relationship of ER-associated degradation in humans.

  • Redemann, Stefanie

    Chromosome segregation and aneuploidy in meiosis and mitosis

  • Rekosh, David M.

    Human Immunodeficiency Virus Gene Expression; Human Endogenous Viruses; SARS-CoV-2 Protein Trafficking; Post-transcriptional Gene Regulation

  • Somlyo, Avril V.

    Novel signal transduction pathways in smooth muscles that regulate contractility and impact diseases of the vasculature, airway and gastrointestinal tract.

  • Sonkusare, Swapnil

    Identify the calcium signaling abnormalities that lead to vascular dysfunction and blood pressure elevation in cardiovascular disorders

  • Tak, Uday

    Prokaryotic immune systems, bacteriophage virology, programmed cell death, pore-forming proteins, evolution of immunity, protein engineering

  • Tamm, Lukas K.

    Biomembrane Structure and Function; Cell Entry of Enveloped Viruses; Neurosecretion by Exocytosis; Structure of Bacterial Pathogen Membrane Proteins; Lipid-Protein Interactions

  • Tsai, Ming-Feng

    Our research focuses on molecular mechanisms and physiological functions of transporters and ion-channels, particularly Ca2+ transport proteins in mitochondria. We approach questions using a wide range of tools, including membrane-biochemistry, electrophysiology, cryo-electron microscopy, and live-cell imaging.

  • Whitlock, Jarred M

    The formation, function, coordination, and pathology of multinucleated cell types that make up the placenta and musculoskeletal system.

  • Xie, Jinghang

    Molecular Imaging; Cancer Immunology; Vaccines; Antibiotic Resistance.

  • Zang, Chongzhi

    Bioinformatics methodology development; Epigenetics and chromatin biology; Transcriptional regulation; Cancer genomics and epigenomics; Statistical methods for biomedical data integration; Advanced machine learning; Theoretical and computational biophysic

  • Zimmer, Jochen

    Transport of biopolymers across biological membranes with a particular interest in polysaccharide and protein translocation.